I believe the answer is
LIARSLIAR
The riddle was tricky (as indicated by the title) and each of the lines besides the first is
a lie.
Left alone, I'm a word with five letters.
The word is actually 4 letters
I'm honest and fair I'll admit
Obviously, a liar is the antithesis of honest and fair.
Rearranged, I'm of no use to trains.
RAILSRAIL, an anagram of LIARSLIAR, areis an incredibly important facet to the function of trains.
Again, and I'm an overt place, warm and well-lit.
LAIRSLAIR, another anagram of LIARSLIAR, areis a hidden, dark placesplace, the opposite of the adjectives provided.
I could be way off track but I have a good feeling that this is it.